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SRX26237512: Amplicon-based sequencing of SARS-CoV-2: VA-DCLS-16299
1 ILLUMINA (Illumina MiSeq) run: 372,988 spots, 72.8M bases, 30.7Mb downloads

Design: sequencing protocol description is ARTIC PCR-tiling of viral cDNA (V4.1), sequenced by Illumina MiSeq with DNA Flex library prep-kit. Only reads aligned to SARS-CoV-2 reference (NC_045512.2) retained.
Submitted by: Virginia Division of Consolidated Laboratory Services Sequencing Submission Group (DCLS-NGS)
Study: SARS-CoV-2_sequencing
PRJNA625551 • SRP256957 • All experiments • All runs
show Abstracthide Abstract
Illumina generated NGS reads of the SARS-CoV-2 genome. The goal is to be able to track the spread and evolution of this virus state-wide, nationally, and internationally.
Sample:
SAMN43985772 • SRS22778780 • All experiments • All runs
Organism: Severe acute respiratory syndrome coronavirus 2
Library:
Name: VA-DCLS-16299
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: VIRAL RNA
Selection: cDNA
Layout: PAIRED
Runs: 1 run, 372,988 spots, 72.8M bases, 30.7Mb
Run# of Spots# of BasesSizePublished
SRR30838259372,98872.8M30.7Mb2024-09-30

ID:
35402541

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